Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2213092Ribonuclease H-like domain-containing protein. (657 aa)    
Predicted Functional Partners:
C2G38_2110899
Bystin.
    
   0.799
C2G38_2222078
Snurportin1 domain-containing protein.
    
 
 0.787
C2G38_2004435
39S mitochondrial ribosomal protein L46-domain-containing protein.
     
  0.751
C2G38_2247260
Uncharacterized protein.
      
 0.669
C2G38_2256205
Uncharacterized protein.
     
 0.652
C2G38_2133458
Nudix hydrolase domain-containing protein.
     
 0.652
C2G38_1582208
Small-subunit processome.
    
   0.645
C2G38_2159121
Utp14 protein.
    
   0.645
C2G38_2047320
Ribosomal protein S5 domain 2-type protein.
    
 0.623
C2G38_2253039
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.622
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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