STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2022673Ceramidase. (257 aa)    
Predicted Functional Partners:
C2G38_2200197
TLC domain-containing protein.
    
 0.780
C2G38_2245585
TLC domain-containing protein.
    
 0.780
C2G38_1980757
ATP-NAD kinase-like domain-containing protein.
    
 0.758
C2G38_2230788
Oxidoreductase.
     
 0.757
C2G38_2199997
Oxidoreductase.
     
 0.757
C2G38_2076218
Oxidoreductase.
     
 0.757
C2G38_1964643
Uncharacterized protein.
     
 0.757
C2G38_1976192
Endonuclease/exonuclease/phosphatase.
    
 0.744
C2G38_1421282
Phosphatidic acid phosphatase type 2/haloperoxidase.
     
 0.716
C2G38_652598
Uncharacterized protein.
    
 0.668
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.