STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2212937Vacuolar sorting protein 39 domain 2-domain-containing protein. (1050 aa)    
Predicted Functional Partners:
C2G38_1981662
Vps16, C-terminal region-domain-containing protein.
   
 0.997
C2G38_2001460
E3 ubiquitin-protein ligase PEP5.
   
 0.997
C2G38_1971025
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.996
C2G38_1951116
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.996
C2G38_2009631
Vacuolar sorting protein 39 domain 2-domain-containing protein.
    
 
0.982
C2G38_2132651
Pep3/Vps18/deep orange family-domain-containing protein.
   
 0.979
C2G38_2167176
Uncharacterized protein.
   
 0.979
C2G38_2214453
Golgi CORVET complex core vacuolar protein 8-domain-containing protein.
   
 
 0.929
C2G38_2174288
Uncharacterized protein.
    
 
 0.904
C2G38_2210395
t-SNARE.
   
 
 0.891
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.