Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1885921Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
C2G38_2131958
Pumilio 2.
    
   0.870
C2G38_2159453
Cytochrome oxidase assembly protein.
    
 
 0.864
C2G38_2210889
Uncharacterized protein.
   
 
 0.845
C2G38_1272978
Uncharacterized protein.
   
  
 0.755
C2G38_2021538
Cytochrome oxidase c subunit VIb-domain-containing protein.
   
  
 0.683
C2G38_2036796
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
  
 0.629
C2G38_2244535
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
      
 0.613
C2G38_2228017
SCO1/SenC-domain-containing protein.
      
 0.561
C2G38_2133577
Cytochrome c oxidase subunit VIb.
   
  
 0.520
C2G38_1919476
Transcriptional Coactivator p15-domain-containing protein.
      
 0.491
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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