STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2252308Copine-domain-containing protein. (529 aa)    
Predicted Functional Partners:
C2G38_2146778
Ribonuclease H2, subunit B.
   
 
 0.775
C2G38_1979297
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.722
C2G38_428257
Uncharacterized protein.
    
 0.695
C2G38_2206545
Protein kinase domain-containing protein.
  
  
  0.678
C2G38_1989802
Phosphatidylinositol 3-kinase VPS34.
    
 0.629
C2G38_2042869
Protein-tyrosine phosphatase-like protein.
     
 0.627
C2G38_1989038
Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.
     
 0.622
C2G38_2123869
SacI homology domain-containing protein.
     
 0.622
C2G38_2146298
Protein-tyrosine phosphatase-like protein.
     
 0.616
C2G38_2178966
Protein-tyrosine phosphatase-like protein.
     
 0.616
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.