Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1940179CWC16 protein. (215 aa)    
Predicted Functional Partners:
C2G38_2045976
Pre-mRNA splicing factor-domain-containing protein.
   
 0.996
C2G38_2047672
SYF2 splicing factor-domain-containing protein.
    
 0.994
C2G38_1997931
Armadillo-type protein.
   
 0.994
C2G38_2202603
WD40-repeat-containing domain protein.
   
 0.993
C2G38_2141156
G-patch domain-containing protein.
    
 0.982
C2G38_1891990
mRNA splicing factor.
    
  0.977
C2G38_2002399
WD40-repeat-containing domain protein.
    
 0.976
C2G38_721175
Cwf21 domain-containing protein.
    
 0.972
C2G38_1988472
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.971
C2G38_35019
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.970
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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