Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2046406Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
C2G38_2081650
Histone H2A; Belongs to the histone H2A family.
    
  0.757
C2G38_49446
TPR_REGION domain-containing protein.
    
  0.738
C2G38_2142715
Histone deacetylase 2-like protein.
    
  0.738
C2G38_2150730
Cir_N domain-containing protein.
    
  0.729
C2G38_484371
Uncharacterized protein.
    
  0.729
C2G38_1982643
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.729
C2G38_2187721
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.729
C2G38_2035361
Histone H2B; Belongs to the histone H2B family.
    
 0.637
C2G38_2014352
Histone H2B; Belongs to the histone H2B family.
    
 0.637
C2G38_2214642
Uncharacterized protein.
    
   0.627
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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