Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2220461Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
C2G38_1285944
Armadillo-type protein.
    
 
 0.916
C2G38_1958885
Armadillo-type protein.
    
 
 0.910
C2G38_2154918
Serine/threonine-protein phosphatase.
    
 
 0.892
C2G38_2132051
Serine/threonine-protein phosphatase.
    
   0.831
C2G38_2226306
WW domain-containing protein.
    
 
 0.789
C2G38_2127362
Serine/threonine-protein phosphatase.
    
   0.781
C2G38_2088107
Component of IIS longevity pathway SMK-1-domain-containing protein.
    
   0.779
C2G38_711889
Uncharacterized protein.
    
   0.759
C2G38_711888
Uncharacterized protein.
    
   0.759
C2G38_2042312
PPP4R2-domain-containing protein.
    
   0.759
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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