Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2212400Uncharacterized protein. (666 aa)    
Predicted Functional Partners:
C2G38_2047921
Uncharacterized protein.
    
 0.938
C2G38_2118182
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.763
C2G38_2050277
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.754
C2G38_2016676
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.745
C2G38_2140917
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.744
C2G38_1933399
ANTH domain-containing protein.
    
 0.728
C2G38_1392407
Uncharacterized protein.
    
 0.708
C2G38_1962740
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.708
C2G38_790466
Serine/threonine-protein kinase.
    
 0.702
C2G38_2252906
Kinase-like domain-containing protein.
    
 0.702
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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