Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2212660Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
C2G38_1267453
Actin family.
   
 0.939
C2G38_2088058
Actin-related protein; Belongs to the actin family.
   
 0.939
C2G38_2250307
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.930
C2G38_432817
Uncharacterized protein.
   
 0.924
C2G38_428257
Uncharacterized protein.
   
 0.893
C2G38_2117740
Fimbrin.
    
 
 0.884
C2G38_1914785
Uncharacterized protein.
   
 0.882
C2G38_2047666
Uncharacterized protein.
   
 0.882
C2G38_426055
Actin family; Belongs to the actin family.
   
 0.882
C2G38_1982447
Uncharacterized protein.
   
 0.882
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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