STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2220010Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
C2G38_2087926
Uncharacterized protein.
    
 0.726
C2G38_2220016
Leo1-like protein.
    
 0.721
C2G38_2074506
Kinase-like domain-containing protein.
    
  0.679
C2G38_575353
Inosine triphosphate pyrophosphatase-like protein.
     
  0.632
C2G38_2251682
O-methyltransferase-domain-containing protein.
     
  0.632
C2G38_2240561
O-methyltransferase-domain-containing protein.
     
  0.632
C2G38_2134345
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.548
C2G38_2024531
Chromatin binding protein.
    
  0.542
C2G38_1988835
Beta-lactamase-like protein.
    
  0.531
C2G38_1971494
Nucleoside diphosphate kinase.
    
  0.531
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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