Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
C2G38_1987452Secretory pathway protein Sec39-domain-containing protein. (1004 aa)    
Predicted Functional Partners:
C2G38_2144739
TIP-1 family-domain-containing protein.
    
 0.997
C2G38_2138460
Centromere/kinetochore Zw10-domain-containing protein.
   
 0.994
C2G38_2290825
Snare-complex protein syntaxin-18 N-terminus-domain-containing protein.
    
 0.987
C2G38_552680
Vesicle transport protein.
    
 0.984
C2G38_2239608
Sec20-domain-containing protein.
    
 0.980
C2G38_2249716
Uncharacterized protein.
    
 0.973
C2G38_2130984
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.951
C2G38_2097416
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 0.949
C2G38_2132895
Snare binding protein Sly1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.915
C2G38_2249078
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.910
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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