C2G38_2133001 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2133001

Cell division/GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (336 aa)

Predicted Functional Partners:

C2G38_1981342

0.936

C2G38_2114630

0.935

C2G38_2023830

0.905

C2G38_2019282

0.870

C2G38_2036797

0.870

C2G38_2131738

0.870

C2G38_2263827

0.870

C2G38_1914785

0.850

C2G38_2230361

0.839

C2G38_2046319

0.828

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1914785	C2G38_1981342	A0A397U3K5	A0A397UIS4	Uncharacterized protein.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.923
C2G38_1914785	C2G38_2019282	A0A397U3K5	A0A397USS5	Uncharacterized protein.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.714
C2G38_1914785	C2G38_2036797	A0A397U3K5	A0A397V938	Uncharacterized protein.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.714
C2G38_1914785	C2G38_2046319	A0A397U3K5	A0A397UD23	Uncharacterized protein.	Coronin; Belongs to the WD repeat coronin family.	0.644
C2G38_1914785	C2G38_2114630	A0A397U3K5	A0A397UE90	Uncharacterized protein.	Putative cell division control protein CDC3; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.892
C2G38_1914785	C2G38_2131738	A0A397U3K5	A0A397VCA3	Uncharacterized protein.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.714
C2G38_1914785	C2G38_2133001	A0A397U3K5	A0A397UDG6	Uncharacterized protein.	Cell division/GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.850
C2G38_1914785	C2G38_2230361	A0A397U3K5	A0A397TXP9	Uncharacterized protein.	Septin-type guanine nucleotide-binding (G) domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.516
C2G38_1914785	C2G38_2263827	A0A397U3K5	A0A397W0L6	Uncharacterized protein.	Septin-type guanine nucleotide-binding (G) domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.714
C2G38_1981342	C2G38_1914785	A0A397UIS4	A0A397U3K5	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Uncharacterized protein.	0.923
C2G38_1981342	C2G38_2019282	A0A397UIS4	A0A397USS5	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.797
C2G38_1981342	C2G38_2023830	A0A397UIS4	A0A397U3Y6	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.917
C2G38_1981342	C2G38_2036797	A0A397UIS4	A0A397V938	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.797
C2G38_1981342	C2G38_2046319	A0A397UIS4	A0A397UD23	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Coronin; Belongs to the WD repeat coronin family.	0.585
C2G38_1981342	C2G38_2114630	A0A397UIS4	A0A397UE90	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Putative cell division control protein CDC3; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.962
C2G38_1981342	C2G38_2131738	A0A397UIS4	A0A397VCA3	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.797
C2G38_1981342	C2G38_2133001	A0A397UIS4	A0A397UDG6	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Cell division/GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.936
C2G38_1981342	C2G38_2263827	A0A397UIS4	A0A397W0L6	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-type guanine nucleotide-binding (G) domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.797
C2G38_2019282	C2G38_1914785	A0A397USS5	A0A397U3K5	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Uncharacterized protein.	0.714
C2G38_2019282	C2G38_1981342	A0A397USS5	A0A397UIS4	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin-domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.797