STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2045295Uncharacterized protein. (118 aa)    
Predicted Functional Partners:
C2G38_2228331
RING-type domain-containing protein.
    
 0.722
C2G38_2049976
CUE domain-containing protein.
    
  0.690
C2G38_1892372
RBR-type E3 ubiquitin transferase.
    
  0.690
C2G38_1974974
RBR-type E3 ubiquitin transferase.
    
  0.690
C2G38_2198616
Ubiquitin-like protein 1.
    
  0.658
C2G38_2033404
Ubiquitin-like domain-containing protein.
    
  0.658
C2G38_1988971
Ubiquitin-like domain-containing protein.
    
  0.645
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
  0.645
C2G38_1235540
Ubiquitin-like domain-containing protein.
    
  0.645
C2G38_2246089
Ubiquitin family-domain-containing protein.
    
  0.645
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.