Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1984704Vacuolar membrane protein. (696 aa)    
Predicted Functional Partners:
C2G38_2148766
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
   
 0.909
C2G38_2226006
VTC domain-containing protein.
  
0.905
C2G38_780042
VTC domain-containing protein.
  
0.905
C2G38_2205224
VTC domain-containing protein.
  
0.905
C2G38_2218224
E3 ubiquitin protein ligase.
    
   0.800
C2G38_1983693
Kinase-like domain-containing protein.
    
 0.781
C2G38_1901868
Kinase-like domain-containing protein.
    
 0.781
C2G38_51668
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.781
C2G38_1966754
Cdc2 cyclin-dependent kinase; Belongs to the protein kinase superfamily.
    
 0.781
C2G38_2244030
Cell division cycle 2-like protein; Belongs to the protein kinase superfamily.
    
 0.781
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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