Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2252726Uncharacterized protein; Belongs to the peptidase C19 family. (3251 aa)    
Predicted Functional Partners:
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
 0.904
C2G38_461214
Uncharacterized protein.
   
 
 0.861
C2G38_2095350
Uncharacterized protein.
   
 
  0.811
C2G38_2247911
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
   0.788
C2G38_2255258
Uncharacterized protein.
    
  0.777
C2G38_118668
Ubiquitin-like domain-containing protein.
    
  0.777
C2G38_1891223
Ubiquitin-related domain-containing protein.
    
  0.777
C2G38_1892727
Ubiquitin-like protein.
    
  0.777
C2G38_2203606
SNF2 family N-terminal domain-containing protein.
   
  0.753
C2G38_1392407
Uncharacterized protein.
    
   0.731
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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