Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2022366E2_bind domain-containing protein. (439 aa)    
Predicted Functional Partners:
C2G38_2195249
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
   
 0.974
C2G38_2198616
Ubiquitin-like protein 1.
    
 0.944
C2G38_2001219
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.943
C2G38_2033404
Ubiquitin-like domain-containing protein.
    
 0.918
C2G38_2023748
Tyrosine--tRNA ligase.
      0.879
C2G38_1130247
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.860
C2G38_1987904
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
  
 0.825
C2G38_1982151
Cullin; Belongs to the cullin family.
   
 0.819
C2G38_2057689
Ubiquitin-like protein pmt3/smt3.
   
 0.817
C2G38_1973269
Ubiquitin-conjugating enzyme/RWD-like protein.
   
 0.802
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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