Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1982711Cation efflux family-domain-containing protein. (293 aa)    
Predicted Functional Partners:
C2G38_2267676
ZIP zinc transporter-domain-containing protein.
   
 0.692
C2G38_1979290
Glycosyltransferase Family 24 protein.
 
      0.601
C2G38_2131450
Cation efflux protein.
  
 
 
0.575
C2G38_1988271
Zinc/iron permease.
    
 
 0.536
C2G38_1988434
Domain found in IF2B/IF5-domain-containing protein.
    
   0.490
C2G38_2142676
Uncharacterized protein.
   
 0.483
C2G38_2084383
Zinc/iron permease.
   
 0.483
C2G38_2034474
ZIP zinc transporter-domain-containing protein.
   
 0.483
C2G38_2314491
Uncharacterized protein.
   
 0.473
C2G38_2061420
CRM1 C terminal-domain-containing protein.
    
  0.472
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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