Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_384837Replication factor A protein 3. (109 aa)    
Predicted Functional Partners:
C2G38_2091790
RPA_C domain-containing protein.
    
 0.883
C2G38_2118650
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.819
C2G38_1906428
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.819
C2G38_2217484
Tryptophan synthase.
     
  0.730
C2G38_1973994
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
     
  0.639
C2G38_1977270
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
     
  0.639
C2G38_2016176
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
     
  0.639
C2G38_2255775
DNA polymerase.
     
  0.630
C2G38_1991238
DNA_pol_B domain-containing protein.
   
 
  0.614
C2G38_1880616
DNA_pol_B domain-containing protein.
   
 
  0.614
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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