Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1982405RING-type domain-containing protein. (174 aa)    
Predicted Functional Partners:
C2G38_2214380
Muts domain V-domain-containing protein.
      
 0.662
C2G38_2018177
Histidine kinase-like ATPase.
      
 0.605
C2G38_2006216
ERCC4 domain-containing protein.
      
 0.598
C2G38_2121795
Meiosis protein SPO22/ZIP4 like-domain-containing protein.
      
 0.596
C2G38_2193608
HORMA domain-containing protein.
      
 0.591
C2G38_631027
Spo11/DNA topoisomerase VI subunit A.
      
 0.559
C2G38_2016176
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
      
 0.557
C2G38_2081650
Histone H2A; Belongs to the histone H2A family.
      
 0.557
C2G38_2020357
Uncharacterized protein.
      
 0.426
C2G38_1503476
RECA_2 domain-containing protein.
      
 0.426
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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