STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_323168Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
C2G38_374978
SANT domain-containing protein.
    
 0.907
C2G38_2030141
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.889
C2G38_1987303
Transcription initiation factor IIF, beta subunit-domain-containing protein.
   
 0.881
C2G38_2251141
DNA-directed RNA polymerase.
   
 0.862
C2G38_2231320
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.856
C2G38_1440814
Enhancer of polycomb-like protein.
    
 0.855
C2G38_1644653
Chromatin modification-related protein EAF7-domain-containing protein.
    
 0.850
C2G38_2134345
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.848
C2G38_2046396
Histone acetyltransferase subunit NuA4-domain-containing protein.
    
 0.841
C2G38_620615
Uncharacterized protein.
   
  0.831
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.