Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2148492PHB domain-containing protein. (362 aa)    
Predicted Functional Partners:
C2G38_1967460
Prohibitin.
   
 
 0.973
C2G38_2075919
Prohibitin.
   
 0.938
C2G38_2256206
Peptidase family M41-domain-containing protein.
   
 0.823
C2G38_2183177
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.820
C2G38_1902127
Presenilins-associated rhomboid-like protein.
   
 0.760
C2G38_1987904
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
   
 
 0.752
C2G38_2094252
Metalloenzyme, LuxS/M16 peptidase-like protein; Belongs to the peptidase M16 family.
   
 0.731
C2G38_1883434
Ribosomal protein S7 domain-containing protein.
   
 
 0.721
C2G38_2000086
Mid region of cactin-domain-containing protein.
 
      0.712
C2G38_1982491
Metalloenzyme, LuxS/M16 peptidase-like protein; Belongs to the peptidase M16 family.
   
 0.707
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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