STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1982301WD_REPEATS_REGION domain-containing protein. (520 aa)    
Predicted Functional Partners:
C2G38_2220016
Leo1-like protein.
    
 0.963
C2G38_2228235
Uncharacterized protein.
    
 0.867
C2G38_2015884
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.847
C2G38_2099252
RNA pol II accessory factor, Cdc73 family-domain-containing protein.
    
 0.843
C2G38_2222422
RAVE protein 1 C terminal-domain-containing protein.
   
 
 0.834
C2G38_604462
Uncharacterized protein.
    
 0.827
C2G38_318243
Uncharacterized protein.
 
      0.819
C2G38_1990941
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.785
C2G38_318284
WD_REPEATS_REGION domain-containing protein.
 
      0.767
C2G38_1956880
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 0.761
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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