Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2218460Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
C2G38_198479
Heat shock protein 60; Belongs to the chaperonin (HSP60) family.
   
 0.832
C2G38_2007217
Peptidase family M41-domain-containing protein.
  
 
 0.790
C2G38_2167737
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 
 0.777
C2G38_2178341
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
 0.766
C2G38_1982491
Metalloenzyme, LuxS/M16 peptidase-like protein; Belongs to the peptidase M16 family.
   
 
 0.764
C2G38_1992840
Malate dehydrogenase, NAD-dependent; Belongs to the LDH/MDH superfamily.
   
 0.760
C2G38_2190995
Malate dehydrogenase, NAD-dependent; Belongs to the LDH/MDH superfamily.
   
 0.760
C2G38_2131958
Pumilio 2.
    
   0.756
C2G38_2050898
Neurochondrin-domain-containing protein.
     
  0.746
C2G38_2196452
Hsp70 protein.
   
 0.742
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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