C2G38_2132997 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2132997

Endoribonuclease L-PSP/chorismate mutase-like protein. (103 aa)

Predicted Functional Partners:

C2G38_2112214

0.730

C2G38_2122301

0.704

C2G38_1976731

0.704

C2G38_2004906

0.676

C2G38_2133412

0.645

C2G38_2250667

0.645

C2G38_2033238

0.639

C2G38_666338

0.614

C2G38_2028439

0.608

C2G38_2131814

0.606

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1976731	C2G38_2028439	A0A397UYR7	A0A397W3D0	Threonine dehydratase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.979
C2G38_1976731	C2G38_2033238	A0A397UYR7	A0A397VNI0	Threonine dehydratase.	Ilv6 regulatory subunit of acetolacetate synthase.	0.949
C2G38_1976731	C2G38_2132997	A0A397UYR7	A0A397UF39	Threonine dehydratase.	Endoribonuclease L-PSP/chorismate mutase-like protein.	0.704
C2G38_2004906	C2G38_2028439	A0A397UKX7	A0A397W3D0	Glycosyltransferase family 21 protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.979
C2G38_2004906	C2G38_2033238	A0A397UKX7	A0A397VNI0	Glycosyltransferase family 21 protein.	Ilv6 regulatory subunit of acetolacetate synthase.	0.856
C2G38_2004906	C2G38_2132997	A0A397UKX7	A0A397UF39	Glycosyltransferase family 21 protein.	Endoribonuclease L-PSP/chorismate mutase-like protein.	0.676
C2G38_2028439	C2G38_1976731	A0A397W3D0	A0A397UYR7	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Threonine dehydratase.	0.979
C2G38_2028439	C2G38_2004906	A0A397W3D0	A0A397UKX7	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Glycosyltransferase family 21 protein.	0.979
C2G38_2028439	C2G38_2033238	A0A397W3D0	A0A397VNI0	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Ilv6 regulatory subunit of acetolacetate synthase.	0.845
C2G38_2028439	C2G38_2112214	A0A397W3D0	A0A397UFM1	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Aspartate aminotransferase.	0.756
C2G38_2028439	C2G38_2122301	A0A397W3D0	A0A397U0Q6	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	C-terminal regulatory domain of threonine dehydratase-domain-containing protein.	0.979
C2G38_2028439	C2G38_2131814	A0A397W3D0	A0A397V809	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Isochorismatase-like protein.	0.923
C2G38_2028439	C2G38_2132997	A0A397W3D0	A0A397UF39	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Endoribonuclease L-PSP/chorismate mutase-like protein.	0.608
C2G38_2028439	C2G38_666338	A0A397W3D0	A0A397U339	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Aspartate aminotransferase.	0.726
C2G38_2033238	C2G38_1976731	A0A397VNI0	A0A397UYR7	Ilv6 regulatory subunit of acetolacetate synthase.	Threonine dehydratase.	0.949
C2G38_2033238	C2G38_2004906	A0A397VNI0	A0A397UKX7	Ilv6 regulatory subunit of acetolacetate synthase.	Glycosyltransferase family 21 protein.	0.856
C2G38_2033238	C2G38_2028439	A0A397VNI0	A0A397W3D0	Ilv6 regulatory subunit of acetolacetate synthase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.845
C2G38_2033238	C2G38_2122301	A0A397VNI0	A0A397U0Q6	Ilv6 regulatory subunit of acetolacetate synthase.	C-terminal regulatory domain of threonine dehydratase-domain-containing protein.	0.949
C2G38_2033238	C2G38_2132997	A0A397VNI0	A0A397UF39	Ilv6 regulatory subunit of acetolacetate synthase.	Endoribonuclease L-PSP/chorismate mutase-like protein.	0.639
C2G38_2112214	C2G38_2028439	A0A397UFM1	A0A397W3D0	Aspartate aminotransferase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.756