STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2147349Uncharacterized protein. (224 aa)    
Predicted Functional Partners:
C2G38_2220016
Leo1-like protein.
    
 0.718
C2G38_1991036
RNA polymerase I.
    
 0.706
C2G38_2125139
DNA directed RNA polymerase.
    
 0.706
C2G38_620615
Uncharacterized protein.
    
 0.706
C2G38_1984256
8 kDa subunit-domain-containing protein.
    
 0.706
C2G38_2251141
DNA-directed RNA polymerase.
    
 0.706
C2G38_1972823
DNA-directed RNA polymerase, subunit RPB6.
    
 0.706
C2G38_1948619
TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.706
C2G38_2014629
BTB/POZ protein; Belongs to the SKP1 family.
    
 0.702
C2G38_2133103
FACT complex subunit-domain-containing protein.
    
 0.700
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.