STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2044669Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (826 aa)    
Predicted Functional Partners:
C2G38_276621
Man1-Src1p-C-terminal domain-containing protein.
    
 0.886
C2G38_2113188
Snf7 family.
    
 
 0.882
C2G38_2127987
Csm1 domain-containing protein.
    
 
 0.880
C2G38_2223152
Uncharacterized protein.
    
 
 0.857
C2G38_1957045
Uncharacterized protein.
    
 
 0.857
C2G38_1898338
Uncharacterized protein.
    
 
 0.857
C2G38_2178966
Protein-tyrosine phosphatase-like protein.
 
  
  0.785
C2G38_2150599
Uncharacterized protein.
    
 0.757
C2G38_2133243
Uncharacterized protein.
    
 0.757
C2G38_2122814
Uncharacterized protein.
    
 0.757
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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