STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (761 aa)    
Predicted Functional Partners:
C2G38_2132100
40S ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
 
 0.983
C2G38_1540132
Ribosomal protein L7/L12 C-terminal domain-containing protein.
  
 
 0.940
C2G38_1883434
Ribosomal protein S7 domain-containing protein.
  
 0.934
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.918
C2G38_2130941
Ribosomal protein L35.
  
 0.917
C2G38_1925404
Ribosomal protein S16 domain-containing protein.
   
 
 0.915
C2G38_1993707
30S ribosomal protein S6.
  
 
 0.911
C2G38_2023778
60S ribosomal protein L7.
  
 0.910
C2G38_2033226
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
0.904
C2G38_1983537
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
 
 0.903
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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