STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2251692P-loop containing nucleoside triphosphate hydrolase protein. (763 aa)    
Predicted Functional Partners:
C2G38_1954948
Uncharacterized protein.
   
 0.948
C2G38_2050738
NPL4 family-domain-containing protein.
   
 0.942
C2G38_1052170
Ubiquitin fusion degradation protein 1.
    
 0.941
C2G38_2036805
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.939
C2G38_2250167
Ubiquitin-like domain-containing protein.
   
 0.931
C2G38_2132241
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.931
C2G38_2256404
UBX domain-containing protein.
    
 0.921
C2G38_245547
Ubiquitin-related domain-containing protein.
    
 0.909
C2G38_344749
Thioredoxin-like protein.
    
 0.907
C2G38_1877423
Machado-joseph disease protein MJD.
    
 0.897
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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