Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_1907190Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (346 aa)    
Predicted Functional Partners:
C2G38_2199556
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.885
C2G38_2120978
Autophagy-related protein 17.
    
 0.881
C2G38_1993755
ADP-ribosylation factor-like protein 8B; Belongs to the small GTPase superfamily. Arf family.
    
 0.764
C2G38_1630992
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.696
C2G38_1979875
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.656
C2G38_2216096
Ornithine aminotransferase.
     
 0.642
C2G38_2065670
TPR_REGION domain-containing protein.
    
  0.641
C2G38_2192922
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.633
C2G38_2198339
TPR_REGION domain-containing protein.
    
  0.618
C2G38_2237557
Beta-ketoacyl synthase.
    
 0.606
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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