Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1981984Pre-rRNA-processing protein TSR2-domain-containing protein. (190 aa)    
Predicted Functional Partners:
C2G38_1341632
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.957
C2G38_2086771
Nin one binding Zn-ribbon like-domain-containing protein.
   
  
 0.893
C2G38_959313
RIO1 family-domain-containing protein.
   
 
 0.891
C2G38_1985049
Ankyrin repeat-containing domain protein.
   
 
 0.889
C2G38_2235147
Uncharacterized protein.
   
 
 0.879
C2G38_2127450
Bms1-type G domain-containing protein.
   
 
 0.879
C2G38_2219102
Ribosome production factor 2.
   
  
 0.878
C2G38_1986257
WD40-repeat-containing domain protein.
   
  
 0.876
C2G38_567202
Sas10/Utp3/C1D family-domain-containing protein.
   
    0.876
C2G38_1987655
Uncharacterized protein.
   
    0.872
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.