C2G38_1981952 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_1981952

Putative NAD(P)-binding-domain-containing protein. (216 aa)

Predicted Functional Partners:

C2G38_1531710

0.968

C2G38_1975876

0.957

C2G38_1958216

0.883

C2G38_1970093

0.878

C2G38_2031537

0.859

C2G38_2129062

0.854

C2G38_2127373

0.848

C2G38_11314

0.842

C2G38_1906023

0.818

C2G38_1052540

0.795

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1052540	C2G38_11314	A0A397TSF0	A0A397UTC9	Phosphoadenosine phosphosulfate reductase.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.993
C2G38_1052540	C2G38_1531710	A0A397TSF0	A0A397V2J7	Phosphoadenosine phosphosulfate reductase.	Tetrapyrrole methylase.	0.874
C2G38_1052540	C2G38_1906023	A0A397TSF0	A0A397UJQ8	Phosphoadenosine phosphosulfate reductase.	FAD-binding FR-type domain-containing protein.	0.980
C2G38_1052540	C2G38_1975876	A0A397TSF0	A0A397UW18	Phosphoadenosine phosphosulfate reductase.	Tetrapyrrole methylase; Belongs to the precorrin methyltransferase family.	0.879
C2G38_1052540	C2G38_1981952	A0A397TSF0	A0A397UFS0	Phosphoadenosine phosphosulfate reductase.	Putative NAD(P)-binding-domain-containing protein.	0.795
C2G38_1052540	C2G38_2127373	A0A397TSF0	A0A397U3B0	Phosphoadenosine phosphosulfate reductase.	Flavodoxin-like domain-containing protein.	0.986
C2G38_11314	C2G38_1052540	A0A397UTC9	A0A397TSF0	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Phosphoadenosine phosphosulfate reductase.	0.993
C2G38_11314	C2G38_1531710	A0A397UTC9	A0A397V2J7	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Tetrapyrrole methylase.	0.846
C2G38_11314	C2G38_1906023	A0A397UTC9	A0A397UJQ8	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	FAD-binding FR-type domain-containing protein.	0.938
C2G38_11314	C2G38_1975876	A0A397UTC9	A0A397UW18	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Tetrapyrrole methylase; Belongs to the precorrin methyltransferase family.	0.846
C2G38_11314	C2G38_1981952	A0A397UTC9	A0A397UFS0	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Putative NAD(P)-binding-domain-containing protein.	0.842
C2G38_11314	C2G38_2127373	A0A397UTC9	A0A397U3B0	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	Flavodoxin-like domain-containing protein.	0.988
C2G38_1531710	C2G38_1052540	A0A397V2J7	A0A397TSF0	Tetrapyrrole methylase.	Phosphoadenosine phosphosulfate reductase.	0.874
C2G38_1531710	C2G38_11314	A0A397V2J7	A0A397UTC9	Tetrapyrrole methylase.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.846
C2G38_1531710	C2G38_1906023	A0A397V2J7	A0A397UJQ8	Tetrapyrrole methylase.	FAD-binding FR-type domain-containing protein.	0.868
C2G38_1531710	C2G38_1958216	A0A397V2J7	A0A397VYW8	Tetrapyrrole methylase.	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.	0.869
C2G38_1531710	C2G38_1970093	A0A397V2J7	A0A397V3G0	Tetrapyrrole methylase.	Porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein.	0.938
C2G38_1531710	C2G38_1981952	A0A397V2J7	A0A397UFS0	Tetrapyrrole methylase.	Putative NAD(P)-binding-domain-containing protein.	0.968
C2G38_1531710	C2G38_2031537	A0A397V2J7	A0A397W0L8	Tetrapyrrole methylase.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.860
C2G38_1531710	C2G38_2127373	A0A397V2J7	A0A397U3B0	Tetrapyrrole methylase.	Flavodoxin-like domain-containing protein.	0.943