STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1983383Vesicle transport protein. (137 aa)    
Predicted Functional Partners:
C2G38_1965491
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.989
C2G38_2131980
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 
 0.978
C2G38_1964054
Orotate phosphoribosyltransferase.
  
 
 0.978
C2G38_275133
Amidohydro-rel domain-containing protein.
  
 
 0.949
C2G38_2198272
Amidohydro-rel domain-containing protein.
  
 
 0.949
C2G38_2149148
Uncharacterized protein.
  
  
 0.901
C2G38_2216937
Carbamoyl-phosphate synthase.
  
  
 0.901
C2G38_1977301
Small subunit of carbamoyl-phosphate synthase.
  
  
 0.901
C2G38_2011989
Uncharacterized protein.
    
 0.851
C2G38_2133540
Class I glutamine amidotransferase-like protein.
    
 0.848
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.