STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1981902Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
C2G38_1978536
PWI domain-containing protein.
   
 0.944
C2G38_122180
RRM domain-containing protein.
   
 0.944
C2G38_122444
Uncharacterized protein.
   
 0.944
C2G38_2019696
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.906
C2G38_2001168
L domain-like protein.
    
 0.906
C2G38_2250186
SART-1 protein.
    
 0.896
C2G38_2117287
Pinin/SDK/memA/ protein conserved region-domain-containing protein.
   
   0.891
C2G38_1979407
Matrin-type domain-containing protein.
    
 0.886
C2G38_1988889
Small nuclear ribonucleoprotein Sm D2.
    
 
 0.874
C2G38_1996840
Suf domain-containing protein.
   
 
 0.872
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.