STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2217508CCHC-type domain-containing protein. (828 aa)    
Predicted Functional Partners:
C2G38_1975285
60S ribosomal protein L21-A.
   
   0.690
C2G38_2148766
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
  0.683
C2G38_2131701
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.682
C2G38_1978818
Cytosolic 60S large ribosomal protein L39.
   
   0.641
C2G38_1991173
60S ribosomal protein L2.
   
 
 0.632
C2G38_2079577
Translation protein SH3-like domain-containing protein.
   
 
 0.614
C2G38_1985551
Eukaryotic porin/Tom40.
    
  0.611
C2G38_1972633
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.608
C2G38_2165312
Uncharacterized protein.
    
 0.608
C2G38_1877775
26S proteasome non-ATPase regulatory subunit 14.
    
  0.592
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.