STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2045698Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
C2G38_2134345
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.859
C2G38_2132695
Actin family; Belongs to the actin family.
   
 0.856
C2G38_2113866
UBC-like protein.
    
 0.852
C2G38_1972258
YL1 nuclear protein.
    
 0.852
C2G38_2213220
Uncharacterized protein; Belongs to the actin family.
    
 0.846
C2G38_1972823
DNA-directed RNA polymerase, subunit RPB6.
    
 0.836
C2G38_2043196
RING-type domain-containing protein.
   
 0.827
C2G38_2032926
Uncharacterized protein.
   
 0.827
C2G38_2057689
Ubiquitin-like protein pmt3/smt3.
    
 0.819
C2G38_463161
DNA-directed RNA polymerases I and III subunit RPAC1-like protein.
    
 0.811
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.