Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2005772Flavin monooxygenase-like protein; Belongs to the FMO family. (484 aa)    
Predicted Functional Partners:
C2G38_1962172
Pyridoxal phosphate-dependent transferase.
    
 0.619
C2G38_2192922
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.525
C2G38_2132577
ATP synthase subunit gamma.
   
   0.499
C2G38_2132599
Uncharacterized protein.
   
   0.498
C2G38_2131958
Pumilio 2.
    
   0.498
C2G38_2007469
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
  0.496
C2G38_2045931
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
  0.496
C2G38_2248164
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
  0.496
C2G38_1996159
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.488
C2G38_2132394
Histidine kinase-like ATPase.
    
   0.481
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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