Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1982834SMAD/FHA domain-containing protein. (237 aa)    
Predicted Functional Partners:
C2G38_2219928
Rab-GTPase-TBC domain-containing protein.
    
 
 0.936
C2G38_790466
Serine/threonine-protein kinase.
    
 
 0.846
C2G38_2327530
Uncharacterized protein.
    
 
 0.842
C2G38_2252816
Uncharacterized protein.
    
 
 0.775
C2G38_2113866
UBC-like protein.
   
 0.698
C2G38_2148699
Kinase-like domain-containing protein.
    
 0.683
C2G38_1970254
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.683
C2G38_2133301
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.675
C2G38_2244524
DSS1/SEM1 family-domain-containing protein.
    
   0.652
C2G38_2263308
Septum-promoting GTP-binding protein.
    
 
 0.613
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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