C2G38_2045296 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2045296

Kinase-like domain-containing protein. (572 aa)

Predicted Functional Partners:

C2G38_2253190

0.786

C2G38_2152542

0.786

C2G38_1911766

0.756

C2G38_2255016

0.737

C2G38_2097116

0.737

C2G38_2217327

0.718

C2G38_2177461

0.718

C2G38_1995301

0.668

C2G38_2132216

0.657

C2G38_2143743

0.657

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1911766	C2G38_2045296	A0A397VT67	A0A397UGS3	Uncharacterized protein.	Kinase-like domain-containing protein.	0.756
C2G38_1911766	C2G38_2177461	A0A397VT67	A0A397VFA6	Uncharacterized protein.	Kinase-like domain-containing protein.	0.956
C2G38_1911766	C2G38_2217327	A0A397VT67	A0A397U7Y0	Uncharacterized protein.	Kinase-like domain-containing protein.	0.956
C2G38_1911766	C2G38_2253190	A0A397VT67	A0A397U9U6	Uncharacterized protein.	Zn_dep_PLPC domain-containing protein.	0.863
C2G38_1995301	C2G38_2045296	A0A397WA79	A0A397UGS3	Kinase-like domain-containing protein.	Kinase-like domain-containing protein.	0.668
C2G38_1995301	C2G38_2253190	A0A397WA79	A0A397U9U6	Kinase-like domain-containing protein.	Zn_dep_PLPC domain-containing protein.	0.592
C2G38_2045296	C2G38_1911766	A0A397UGS3	A0A397VT67	Kinase-like domain-containing protein.	Uncharacterized protein.	0.756
C2G38_2045296	C2G38_1995301	A0A397UGS3	A0A397WA79	Kinase-like domain-containing protein.	Kinase-like domain-containing protein.	0.668
C2G38_2045296	C2G38_2097116	A0A397UGS3	A0A397UXQ2	Kinase-like domain-containing protein.	Phorbol-ester/DAG-type domain-containing protein.	0.737
C2G38_2045296	C2G38_2132216	A0A397UGS3	A0A397UWG1	Kinase-like domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.657
C2G38_2045296	C2G38_2143743	A0A397UGS3	A0A397V0Y5	Kinase-like domain-containing protein.	Kinase-like domain-containing protein.	0.657
C2G38_2045296	C2G38_2152542	A0A397UGS3	A0A397W772	Kinase-like domain-containing protein.	BZIP domain-containing protein.	0.786
C2G38_2045296	C2G38_2177461	A0A397UGS3	A0A397VFA6	Kinase-like domain-containing protein.	Kinase-like domain-containing protein.	0.718
C2G38_2045296	C2G38_2217327	A0A397UGS3	A0A397U7Y0	Kinase-like domain-containing protein.	Kinase-like domain-containing protein.	0.718
C2G38_2045296	C2G38_2253190	A0A397UGS3	A0A397U9U6	Kinase-like domain-containing protein.	Zn_dep_PLPC domain-containing protein.	0.786
C2G38_2045296	C2G38_2255016	A0A397UGS3	A0A397U2K8	Kinase-like domain-containing protein.	Fe/B12 periplasmic-binding domain-containing protein.	0.737
C2G38_2097116	C2G38_2045296	A0A397UXQ2	A0A397UGS3	Phorbol-ester/DAG-type domain-containing protein.	Kinase-like domain-containing protein.	0.737
C2G38_2097116	C2G38_2132216	A0A397UXQ2	A0A397UWG1	Phorbol-ester/DAG-type domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.746
C2G38_2097116	C2G38_2143743	A0A397UXQ2	A0A397V0Y5	Phorbol-ester/DAG-type domain-containing protein.	Kinase-like domain-containing protein.	0.746
C2G38_2097116	C2G38_2152542	A0A397UXQ2	A0A397W772	Phorbol-ester/DAG-type domain-containing protein.	BZIP domain-containing protein.	0.797