Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2043996Sec63 Brl domain-containing protein. (699 aa)    
Predicted Functional Partners:
C2G38_2220066
Protein transporter SEC61 alpha subunit.
   
 
 0.998
C2G38_2031535
Translocation protein Sec62-domain-containing protein.
   
 0.998
C2G38_2101188
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.994
C2G38_2193999
Uncharacterized protein.
    
 
 0.994
C2G38_2230859
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
  
 
 0.984
C2G38_2014757
Pre protein translocase subunit Sec66-domain-containing protein.
    
 0.981
C2G38_2159122
Glycosyltransferase Family 66 protein.
   
 
 0.979
C2G38_1953843
SRP54-type protein.
   
 
 0.969
C2G38_2029640
SRP54-type protein.
   
 
 0.969
C2G38_2022639
Kinase-like domain-containing protein.
    
 
 0.964
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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