Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1982989RRM domain-containing protein. (136 aa)    
Predicted Functional Partners:
C2G38_2229925
SMAD/FHA domain-containing protein.
   
 0.989
C2G38_1984400
Pre-mRNA-splicing factor of RES complex-domain-containing protein.
   
 0.973
C2G38_2195007
Uncharacterized protein.
   
 0.973
C2G38_2012660
Uncharacterized protein.
    
0.968
C2G38_2213095
Splicing factor 3B subunit 1.
    
 0.961
C2G38_1702127
Uncharacterized protein.
   
 0.956
C2G38_1976296
PHF5-like protein.
    
 
 0.954
C2G38_1998107
Isy1-like splicing factor.
   
 
 0.953
C2G38_2156242
Sec63 Brl domain-containing protein.
    
 
 0.951
C2G38_2047672
SYF2 splicing factor-domain-containing protein.
    
 0.950
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: medium (50%) [HD]