STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2046391Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
C2G38_2187295
TH1 protein.
   
 0.931
C2G38_720329
Uncharacterized protein.
    
 0.893
C2G38_2012223
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
   
 0.881
C2G38_2251141
DNA-directed RNA polymerase.
    
 0.858
C2G38_1948619
TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.856
C2G38_2058518
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.839
C2G38_1995206
Spt4/RpoE2 zinc finger-domain-containing protein.
    
 0.839
C2G38_1991036
RNA polymerase I.
    
  0.837
C2G38_1874065
Acetyl/propionyl-CoA carboxylase subunit alpha.
   
 0.836
C2G38_1961961
Carbamoyl-phosphate synthase L chain, ATP binding domain-containing protein.
   
 0.836
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.