STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_314858BZIP domain-containing protein. (286 aa)    
Predicted Functional Partners:
C2G38_1978248
Kinase-like domain-containing protein.
    
 0.867
C2G38_1991173
60S ribosomal protein L2.
    
  0.840
C2G38_2079577
Translation protein SH3-like domain-containing protein.
    
  0.816
C2G38_2101188
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.773
C2G38_2132063
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
 
 0.760
C2G38_394958
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.748
C2G38_2018805
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
     
 0.747
C2G38_1341632
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
 
 0.747
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.739
C2G38_1963177
40S ribosomal protein S1.
    
 
 0.735
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.