STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2146312TPR_REGION domain-containing protein. (563 aa)    
Predicted Functional Partners:
C2G38_2242815
Uncharacterized protein.
   
 0.715
C2G38_884558
Uncharacterized protein.
   
 0.715
C2G38_2147844
Ubiquitin carboxyl-terminal hydrolase.
    
  0.572
C2G38_1988462
Ubiquitin carboxyl-terminal hydrolase.
    
  0.572
C2G38_250810
Ubiquitin carboxyl-terminal hydrolase.
    
  0.572
C2G38_2049768
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.505
C2G38_2154830
B30.2/SPRY domain-containing protein.
    
   0.492
C2G38_2024531
Chromatin binding protein.
    
   0.484
C2G38_1969977
Uncharacterized protein.
    
   0.481
C2G38_2251611
Kinase-like domain-containing protein.
     
  0.467
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.