STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2251730RNA polymerase II transcription factor SIII subunit A-domain-containing protein. (385 aa)    
Predicted Functional Partners:
C2G38_2220016
Leo1-like protein.
    
 0.997
C2G38_2014629
BTB/POZ protein; Belongs to the SKP1 family.
    
 0.995
C2G38_1977220
Eukaryotic ribosomal protein L18.
   
   0.938
C2G38_2132578
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.935
C2G38_2132063
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.935
C2G38_1943939
60S ribosomal protein.
    
   0.935
C2G38_2000617
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.935
C2G38_2131701
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
    
   0.935
C2G38_1323971
Ribosomal protein L22e.
    
   0.935
C2G38_2130941
Ribosomal protein L35.
    
   0.935
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (28%) [HD]