STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2216129Fip1 domain-containing protein. (123 aa)    
Predicted Functional Partners:
C2G38_1969518
WD40-repeat-containing domain protein.
   
 0.970
C2G38_1985499
Beta-lactamase-like protein.
   
 0.967
C2G38_2128194
Symplekin tight junction protein C terminal-domain-containing protein.
    
 0.953
C2G38_1201310
RRM domain-containing protein.
   
 0.953
C2G38_2209438
CID domain-containing protein.
    
 0.938
C2G38_2247050
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.931
C2G38_2127177
CPSF A subunit region-domain-containing protein.
   
 0.928
C2G38_2037154
Uncharacterized protein.
    
 0.928
C2G38_433968
Ssu72-like protein.
    
 0.925
C2G38_669675
DWNN domain-containing protein.
    
 0.920
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.