STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2046475Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
C2G38_2004435
39S mitochondrial ribosomal protein L46-domain-containing protein.
   
   0.819
C2G38_2134278
Translation protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.817
C2G38_1975761
Translation protein SH3-like domain-containing protein.
   
 
 0.788
C2G38_1128270
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
   0.785
C2G38_2011529
Ribosomal L27 protein.
   
 
 0.779
C2G38_1985957
Ribosomal L28 family-domain-containing protein.
   
 
 0.778
C2G38_1967491
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.776
C2G38_2019120
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.771
C2G38_2008379
50S ribosomal protein L4.
   
 
 0.769
C2G38_1986765
Mitochondrial ribosomal subunit protein.
   
   0.767
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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