STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2146282Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
C2G38_2074506
Kinase-like domain-containing protein.
    
  0.728
C2G38_2109223
SGS domain-containing protein.
    
  0.470
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
  0.465
C2G38_2218424
Uncharacterized protein.
    
  0.453
C2G38_2037795
Uncharacterized protein.
    
  0.453
C2G38_2137193
WD40-repeat-containing domain protein.
    
  0.444
C2G38_2156756
WD40-repeat-containing domain protein.
    
  0.434
C2G38_2211035
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.422
C2G38_100290
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.422
C2G38_2254644
Uncharacterized protein.
    
  0.413
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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