STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_310451Uncharacterized protein. (718 aa)    
Predicted Functional Partners:
C2G38_2228402
Mannose-6-phosphate isomerase.
    
 0.891
C2G38_1993150
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.884
C2G38_1998802
Dihydrofolate reductase-like domain-containing protein.
  
 
 0.884
C2G38_2131519
Phosphotransferase.
   
 
 0.873
C2G38_1953019
Phosphotransferase.
   
 
 0.873
C2G38_1985358
Oxidoreductase.
  
 
 0.867
C2G38_2248805
Alpha-amylase.
  
 
 0.867
C2G38_1903738
Fe2OG dioxygenase domain-containing protein.
  
 
 0.867
C2G38_2221941
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.856
C2G38_2090092
Glycosyl hydrolases family 31 protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.840
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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