STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1980682DnaJ domain-containing protein. (504 aa)    
Predicted Functional Partners:
C2G38_1998594
C2H2 type zinc-finger-domain-containing protein.
   
 
 0.936
C2G38_2144822
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.928
C2G38_2290827
Peptidase M24, structural domain-containing protein.
   
 
 0.900
C2G38_2221304
Peptidase M24, structural domain-containing protein.
   
 
 0.900
C2G38_2034319
Uncharacterized protein.
   
 
 0.845
C2G38_2131958
Pumilio 2.
    
 
 0.819
C2G38_2200830
Thioredoxin-like protein.
    
  0.809
C2G38_1989812
Glutathione synthetase.
     
  0.800
C2G38_1985369
M20_dimer domain-containing protein.
     
  0.800
C2G38_2209742
Cytosol aminopeptidase.
     
  0.800
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.