STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1980682DnaJ domain-containing protein. (504 aa)    
Predicted Functional Partners:
C2G38_1998594
C2H2 type zinc-finger-domain-containing protein.
    
 
 0.814
C2G38_2144822
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.785
C2G38_2200830
Thioredoxin-like protein.
    
  0.759
C2G38_2290827
Peptidase M24, structural domain-containing protein.
   
 
 0.720
C2G38_2221304
Peptidase M24, structural domain-containing protein.
   
 
 0.720
C2G38_2034319
Uncharacterized protein.
   
 
0.685
C2G38_2020590
DnaJ domain-containing protein.
   
 
 0.641
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
 
 0.610
C2G38_2131958
Pumilio 2.
    
   0.589
C2G38_1966864
Peroxiredoxin.
    
  0.543
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.